automatic import of R-CRAN-ggriskf38

3 files changed, 77 insertions, 0 deletions

diff --git a/.gitignore b/.gitignore
index e69de29..1b345a0 100644
--- a/.gitignore
+++ b/.gitignore
@@ -0,0 +1 @@
+/ggrisk_1.3.tar.gz
diff --git a/R-CRAN-ggrisk.spec b/R-CRAN-ggrisk.spec
new file mode 100644
index 0000000..7222b2b
--- /dev/null
+++ b/R-CRAN-ggrisk.spec
@@ -0,0 +1,75 @@
+%global __brp_check_rpaths %{nil}
+%global packname  ggrisk
+%global packver   1.3
+%global rlibdir   /usr/local/lib/R/library
+
+Name:             R-CRAN-%{packname}
+Version:          1.3
+Release:          1%{?dist}%{?buildtag}
+Summary:          Risk Score Plot for Cox Regression
+
+License:          GPL-2
+URL:              https://cran.r-project.org/package=%{packname}
+Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz
+
+
+BuildRequires:    R-devel >= 2.10
+Requires:         R-core >= 2.10
+BuildArch:        noarch
+BuildRequires:    R-CRAN-ggplot2 
+BuildRequires:    R-CRAN-survival 
+BuildRequires:    R-CRAN-egg 
+BuildRequires:    R-CRAN-do 
+BuildRequires:    R-CRAN-set 
+BuildRequires:    R-CRAN-cutoff 
+BuildRequires:    R-grid 
+BuildRequires:    R-CRAN-rms 
+BuildRequires:    R-CRAN-nomogramFormula 
+BuildRequires:    R-CRAN-reshape2 
+Requires:         R-CRAN-ggplot2 
+Requires:         R-CRAN-survival 
+Requires:         R-CRAN-egg 
+Requires:         R-CRAN-do 
+Requires:         R-CRAN-set 
+Requires:         R-CRAN-cutoff 
+Requires:         R-grid 
+Requires:         R-CRAN-rms 
+Requires:         R-CRAN-nomogramFormula 
+Requires:         R-CRAN-reshape2 
+
+%description
+The risk plot may be one of the most commonly used figures in tumor
+genetic data analysis. We can conclude the following two points: Comparing
+the prediction results of the model with the real survival situation to
+see whether the survival rate of the high-risk group is lower than that of
+the low-level group, and whether the survival time of the high-risk group
+is shorter than that of the low-risk group. The other is to compare the
+heat map and scatter plot to see the correlation between the predictors
+and the outcome.
+
+%prep
+%setup -q -c -n %{packname}
+
+# fix end of executable files
+find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
+# prevent binary stripping
+[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
+  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
+[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
+  sed -i 's@-g0@@g' {} \; || true
+# don't allow local prefix in executable scripts
+find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;
+
+%build
+
+%install
+
+mkdir -p %{buildroot}%{rlibdir}
+%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
+test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
+rm -f %{buildroot}%{rlibdir}/R.css
+# remove buildroot from installed files
+find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;
+
+%files
+%{rlibdir}/%{packname}
diff --git a/sources b/sources
new file mode 100644
index 0000000..3ac7dcb
--- /dev/null
+++ b/sources
@@ -0,0 +1 @@
+ea6fce4d90768de096e57d1b809d15f5  ggrisk_1.3.tar.gz