automatic import of R-CRAN-kindispersef35

3 files changed, 95 insertions, 0 deletions

diff --git a/.gitignore b/.gitignore
index e69de29..26ded32 100644
--- a/.gitignore
+++ b/.gitignore
@@ -0,0 +1 @@
+/kindisperse_0.10.2.tar.gz
diff --git a/R-CRAN-kindisperse.spec b/R-CRAN-kindisperse.spec
new file mode 100644
index 0000000..2c00716
--- /dev/null
+++ b/R-CRAN-kindisperse.spec
@@ -0,0 +1,93 @@
+%global __brp_check_rpaths %{nil}
+%global packname  kindisperse
+%global packver   0.10.2
+%global rlibdir   /usr/local/lib/R/library
+
+Name:             R-CRAN-%{packname}
+Version:          0.10.2
+Release:          1%{?dist}%{?buildtag}
+Summary:          Simulate and Estimate Close-Kin Dispersal Kernels
+
+License:          MIT + file LICENSE
+URL:              https://cran.r-project.org/package=%{packname}
+Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz
+
+
+BuildRequires:    R-devel >= 2.10
+Requires:         R-core >= 2.10
+BuildArch:        noarch
+BuildRequires:    R-CRAN-ggplot2 
+BuildRequires:    R-CRAN-readr 
+BuildRequires:    R-CRAN-shiny 
+BuildRequires:    R-CRAN-shinythemes 
+BuildRequires:    R-CRAN-ggrepel 
+BuildRequires:    R-CRAN-fitdistrplus 
+BuildRequires:    R-CRAN-LaplacesDemon 
+BuildRequires:    R-CRAN-here 
+BuildRequires:    R-stats 
+BuildRequires:    R-methods 
+BuildRequires:    R-CRAN-tibble 
+BuildRequires:    R-grid 
+BuildRequires:    R-CRAN-magrittr 
+BuildRequires:    R-CRAN-plotly 
+BuildRequires:    R-CRAN-dplyr 
+BuildRequires:    R-CRAN-rlang 
+BuildRequires:    R-CRAN-tidyselect 
+BuildRequires:    R-CRAN-stringr 
+Requires:         R-CRAN-ggplot2 
+Requires:         R-CRAN-readr 
+Requires:         R-CRAN-shiny 
+Requires:         R-CRAN-shinythemes 
+Requires:         R-CRAN-ggrepel 
+Requires:         R-CRAN-fitdistrplus 
+Requires:         R-CRAN-LaplacesDemon 
+Requires:         R-CRAN-here 
+Requires:         R-stats 
+Requires:         R-methods 
+Requires:         R-CRAN-tibble 
+Requires:         R-grid 
+Requires:         R-CRAN-magrittr 
+Requires:         R-CRAN-plotly 
+Requires:         R-CRAN-dplyr 
+Requires:         R-CRAN-rlang 
+Requires:         R-CRAN-tidyselect 
+Requires:         R-CRAN-stringr 
+
+%description
+Functions for simulating and estimating kinship-related dispersal. Based
+on the methods described in M. Jasper, T.L. Schmidt., N.W. Ahmad, S.P.
+Sinkins & A.A. Hoffmann (2019) <doi:10.1111/1755-0998.13043> "A genomic
+approach to inferring kinship reveals limited intergenerational dispersal
+in the yellow fever mosquito". Assumes an additive variance model of
+dispersal in two dimensions, compatible with Wright's neighbourhood area.
+Simple and composite dispersal simulations are supplied, as well as the
+functions needed to estimate parent-offspring dispersal for simulated or
+empirical data, and to undertake sampling design for future field studies
+of dispersal. For ease of use an integrated Shiny app is also included.
+
+%prep
+%setup -q -c -n %{packname}
+
+# fix end of executable files
+find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
+# prevent binary stripping
+[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
+  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
+[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
+  sed -i 's@-g0@@g' {} \; || true
+# don't allow local prefix in executable scripts
+find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;
+
+%build
+
+%install
+
+mkdir -p %{buildroot}%{rlibdir}
+%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
+test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
+rm -f %{buildroot}%{rlibdir}/R.css
+# remove buildroot from installed files
+find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;
+
+%files
+%{rlibdir}/%{packname}
diff --git a/sources b/sources
new file mode 100644
index 0000000..3ff539a
--- /dev/null
+++ b/sources
@@ -0,0 +1 @@
+5e3ef73c9fba7ca35ea2716888c0699b  kindisperse_0.10.2.tar.gz